/*============================================================================

The Medical Imaging Interaction Toolkit (MITK)

Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.

Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.

============================================================================*/

#include <mitkIOUtil.h>
#include <mitkImagePixelReadAccessor.h>
#include <mitkImageWriteAccessor.h>
#include <mitkTestingMacros.h>

#include "mitkSurfaceToImageFilter.h"

#include "mitkTestFixture.h"
#include <vtkPolyData.h>

class mitkSurfaceToImageFilterTestSuite : public mitk::TestFixture
{
  CPPUNIT_TEST_SUITE(mitkSurfaceToImageFilterTestSuite);
  MITK_TEST(test3DSurfaceValidOutput);
  MITK_TEST(test3DSurfaceCorrect);
  MITK_TEST(test3DSurfaceIn4DImage);
  CPPUNIT_TEST_SUITE_END();

private:
  /** Members used inside the different test methods. All members are initialized via setUp().*/
  mitk::Surface::Pointer m_Surface;

public:
  /**
   * @brief Setup Always call this method before each Test-case to ensure correct and new intialization of the used
   * members for a new test case. (If the members are not used in a test, the method does not need to be called).
   */
  void setUp() override { m_Surface = mitk::IOUtil::Load<mitk::Surface>(GetTestDataFilePath("ball.stl")); }
  void tearDown() override {}
  void test3DSurfaceValidOutput()
  {
    mitk::SurfaceToImageFilter::Pointer surfaceToImageFilter = mitk::SurfaceToImageFilter::New();

    mitk::Image::Pointer additionalInputImage = mitk::Image::New();
    additionalInputImage->Initialize(mitk::MakeScalarPixelType<unsigned int>(), *m_Surface->GetTimeGeometry());

    // Arrange the filter
    surfaceToImageFilter->MakeOutputBinaryOn();
    surfaceToImageFilter->SetInput(m_Surface);
    surfaceToImageFilter->SetImage(additionalInputImage);
    surfaceToImageFilter->Update();

    CPPUNIT_ASSERT_MESSAGE(
      "SurfaceToImageFilter_AnyInputImageAndModeSetToBinary_ResultIsImageWithUCHARPixelType",
      surfaceToImageFilter->GetOutput()->GetPixelType().GetComponentType() == itk::ImageIOBase::UCHAR);

    surfaceToImageFilter->SetUShortBinaryPixelType(true);
    surfaceToImageFilter->Update();

    CPPUNIT_ASSERT_MESSAGE(
      "SurfaceToImageFilter_AnyInputImageAndModeSetToBinary_ResultIsImageWithUCHARPixelType",
      surfaceToImageFilter->GetOutput()->GetPixelType().GetComponentType() == itk::ImageIOBase::USHORT);
  }

  void test3DSurfaceCorrect()
  {
    mitk::SurfaceToImageFilter::Pointer surfaceToImageFilter = mitk::SurfaceToImageFilter::New();

    // todo I don't know if this image is always needed. There is no documentation of the filter. Use git blame and ask
    // the author.
    mitk::Image::Pointer additionalInputImage = mitk::Image::New();
    auto *dims = new unsigned int[3];
    dims[0] = 32;
    dims[1] = 32;
    dims[2] = 32;
    additionalInputImage->Initialize(mitk::MakeScalarPixelType<unsigned int>(), 3, dims);
    additionalInputImage->SetOrigin(m_Surface->GetGeometry()->GetOrigin());
    additionalInputImage->GetGeometry()->SetIndexToWorldTransform(m_Surface->GetGeometry()->GetIndexToWorldTransform());
    // Arrange the filter
    // The docu does not really tell if this is always needed. Could we skip SetImage in any case?
    surfaceToImageFilter->MakeOutputBinaryOn();
    surfaceToImageFilter->SetInput(m_Surface);
    surfaceToImageFilter->SetImage(additionalInputImage);
    surfaceToImageFilter->Update();

    mitk::ImagePixelReadAccessor<unsigned char, 3> outputReader(surfaceToImageFilter->GetOutput());
    itk::Index<3> idx;
    bool valuesCorrect = true;
    // Values outside the ball should be 0
    idx[0] = 0;
    idx[1] = 0, idx[2] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 0;
    idx[1] = 15, idx[2] = 15;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 15;
    idx[1] = 15, idx[2] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 15;
    idx[1] = 0, idx[2] = 15;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 5;
    idx[1] = 9, idx[2] = 23;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    // Values inside the ball should be 1
    idx[0] = 15;
    idx[1] = 15, idx[2] = 15;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);
    idx[0] = 31;
    idx[1] = 15, idx[2] = 15;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);
    idx[0] = 2;
    idx[1] = 15, idx[2] = 15;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);
    idx[0] = 15;
    idx[1] = 15, idx[2] = 2;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);
    idx[0] = 15;
    idx[1] = 2, idx[2] = 15;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);
    idx[0] = 6;
    idx[1] = 9, idx[2] = 23;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);

    CPPUNIT_ASSERT_MESSAGE("SurfaceToImageFilter_BallSurfaceAsInput_OutputCorrect", valuesCorrect == true);
  }

  void test3DSurfaceIn4DImage()
  {
    mitk::SurfaceToImageFilter::Pointer surfaceToImageFilter = mitk::SurfaceToImageFilter::New();

    mitk::Image::Pointer additionalInputImage = mitk::Image::New();
    auto *dims = new unsigned int[4];
    dims[0] = 32;
    dims[1] = 32;
    dims[2] = 32;
    dims[3] = 2;
    additionalInputImage->Initialize(mitk::MakeScalarPixelType<unsigned int>(), 4, dims);
    additionalInputImage->SetOrigin(m_Surface->GetGeometry()->GetOrigin());
    additionalInputImage->GetGeometry()->SetIndexToWorldTransform(m_Surface->GetGeometry()->GetIndexToWorldTransform());
    mitk::Image::Pointer secondStep = additionalInputImage->Clone();

    unsigned int size = sizeof(unsigned char);
    for (unsigned int i = 0; i < secondStep->GetDimension(); ++i)
    {
      size *= secondStep->GetDimension(i);
    }

    {
      mitk::ImageWriteAccessor accessor(secondStep);
      memset(accessor.GetData(), 1, size);
    }

    additionalInputImage->GetTimeGeometry()->Expand(2);
    additionalInputImage->GetGeometry(1)->SetSpacing(secondStep->GetGeometry()->GetSpacing());
    additionalInputImage->GetGeometry(1)->SetOrigin(secondStep->GetGeometry()->GetOrigin());
    additionalInputImage->GetGeometry(1)->SetIndexToWorldTransform(
      secondStep->GetGeometry()->GetIndexToWorldTransform());

    {
      mitk::ImageReadAccessor readAccess(secondStep);
      additionalInputImage->SetImportVolume(readAccess.GetData(), 0);
      additionalInputImage->SetImportVolume(readAccess.GetData(), 1);
    }

    // Arrange the filter
    surfaceToImageFilter->MakeOutputBinaryOn();
    surfaceToImageFilter->SetInput(m_Surface);
    surfaceToImageFilter->SetImage(additionalInputImage);

    surfaceToImageFilter->Update();

    mitk::ImagePixelReadAccessor<unsigned char, 4> outputReader(surfaceToImageFilter->GetOutput());
    itk::Index<4> idx;
    bool valuesCorrect = true;
    // Values outside the ball should be 0
    idx[0] = 0;
    idx[1] = 0, idx[2] = 0;
    idx[3] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 0;
    idx[1] = 15, idx[2] = 15;
    idx[3] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 15;
    idx[1] = 15, idx[2] = 0;
    idx[3] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 15;
    idx[1] = 0, idx[2] = 15;
    idx[3] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 5;
    idx[1] = 9, idx[2] = 23;
    idx[3] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    // Values inside the ball should be 1   hould be 1
    idx[0] = 15;
    idx[1] = 15, idx[2] = 15;
    idx[3] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);
    idx[0] = 31;
    idx[1] = 15, idx[2] = 15;
    idx[3] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);
    idx[0] = 2;
    idx[1] = 15, idx[2] = 15;
    idx[3] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);
    idx[0] = 15;
    idx[1] = 15, idx[2] = 2;
    idx[3] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);
    idx[0] = 15;
    idx[1] = 2, idx[2] = 15;
    idx[3] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);
    idx[0] = 6;
    idx[1] = 9, idx[2] = 23;
    idx[3] = 0;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 1);
    // Values inside the ball but in the second timestep hould be 0
    idx[0] = 15;
    idx[1] = 15, idx[2] = 15;
    idx[3] = 1;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 31;
    idx[1] = 15, idx[2] = 15;
    idx[3] = 1;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 2;
    idx[1] = 15, idx[2] = 15;
    idx[3] = 1;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 15;
    idx[1] = 15, idx[2] = 2;
    idx[3] = 1;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 15;
    idx[1] = 2, idx[2] = 15;
    idx[3] = 1;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);
    idx[0] = 6;
    idx[1] = 9, idx[2] = 23;
    idx[3] = 1;
    valuesCorrect = valuesCorrect && (outputReader.GetPixelByIndex(idx) == 0);

    CPPUNIT_ASSERT_MESSAGE("SurfaceToImageFilter_BallSurfaceAsInput_Output4DCorrect", valuesCorrect == true);
  }
};
MITK_TEST_SUITE_REGISTRATION(mitkSurfaceToImageFilter)
